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11:59211188 G / A


Filter Status
PASS
dbSNP
rs6591536
Allele Frequency
0.66
Filtering AF
0.7399 (South Asian)
Allele Count
80117 / 121386
UCSC
11-59211188-G-A
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Annotations

This variant falls on 1 transcripts in 1 genes:

missense
Note: This list may not include additional transcripts in the same gene that the variant does not overlap.
Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 44848 66732 15132 0.6721
East Asian 6419 8650 2401 0.7421
Other 591 908 196 0.6509
African 4962 10406 1193 0.4768
Latino 6495 11568 1847 0.5615
South Asian 12397 16508 4671 0.751
European (Finnish) 4405 6614 1462 0.666
Total 80117 121386 26902 0.66

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.