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11:6415766 TGCC / T


Filter Status
PASS
dbSNP
rs120074118
Allele Frequency
0.0001669
Filtering AF
0.000164 (European (Non-Finnish))
Allele Count
20 / 119842
UCSC
11-6415766-TGCC-T
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Annotations

This variant falls on 26 transcripts in 2 genes:

Note: This list may not include additional transcripts in the same gene that the variant does not overlap.
Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 17 65744 0 0.0002586
East Asian 0 8576 0 0
Other 0 904 0 0
African 2 9986 0 0.0002003
Latino 1 11540 0 8.666e-05
South Asian 0 16496 0 0
European (Finnish) 0 6596 0 0
Total 20 119842 0 0.0001669

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.