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11:65211979 G / A


Warning! This variant is only covered in 15087 individuals (adjusted allele number = 30174).
This means that the site is covered in fewer than 80% of the individuals in ExAC, which may indicate a low-quality site.


Filter Status
PASS
dbSNP
rs12803915
Allele Frequency
0.2555
Filtering AF
0.3209 (European (Non-Finnish))
Allele Count
7708 / 30174
UCSC
11-65211979-G-A
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Annotations

This variant falls on 2 transcripts in 1 genes:

non coding transcript exon
Note: This list may not include additional transcripts in the same gene that the variant does not overlap.
Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 4935 15022 477 0.3285
East Asian 453 1526 36 0.2969
Other 68 272 7 0.25
African 532 3252 33 0.1636
Latino 409 1286 19 0.318
South Asian 1166 8414 86 0.1386
European (Finnish) 145 402 9 0.3607
Total 7708 30174 667 0.2555

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.