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11:66328095 T / C


Filter Status
PASS
dbSNP
rs1815739
Allele Frequency
0.548
Filtering AF
0.8177 (African)
Allele Count
66085 / 120586
UCSC
11-66328095-T-C
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Annotations

This variant falls on 9 transcripts in 3 genes:

Note: This list may not include additional transcripts in the same gene that the variant does not overlap.
Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 37508 66612 10555 0.5631
East Asian 4730 8584 1311 0.551
Other 518 896 149 0.5781
African 8203 9850 3427 0.8328
Latino 3675 11550 624 0.3182
South Asian 6935 16500 1499 0.4203
European (Finnish) 4516 6594 1571 0.6849
Total 66085 120586 19136 0.548

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.