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11:67258382 G / A


Filter Status
PASS
dbSNP
rs104894190
Allele Frequency
0.001458
Filtering AF
0.002137 (European (Non-Finnish))
Allele Count
170 / 116638
UCSC
11-67258382-G-A
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Annotations

This variant falls on 11 transcripts in 2 genes:

missense
Note: This list may not include additional transcripts in the same gene that the variant does not overlap.
Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 156 63650 2 0.002451
East Asian 1 8504 0 0.0001176
Other 1 832 0 0.001202
African 1 9796 0 0.0001021
Latino 10 11354 0 0.0008807
South Asian 0 16412 0 0
European (Finnish) 1 6090 0 0.0001642
Total 170 116638 2 0.001458

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.