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11:8149753 T / G


Warning! This variant is only covered in 8003 individuals (adjusted allele number = 16006).
This means that the site is covered in fewer than 80% of the individuals in ExAC, which may indicate a low-quality site.


Filter Status
PASS
dbSNP
rs1528133
Allele Frequency
0.0929
Filtering AF
0.1155 (African)
Allele Count
1487 / 16006
UCSC
11-8149753-T-G
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Annotations

This variant falls on 11 transcripts in 1 genes:

Note: This list may not include additional transcripts in the same gene that the variant does not overlap.
Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 398 5130 13 0.07758
East Asian 14 206 0 0.06796
Other 10 194 0 0.05155
African 123 912 9 0.1349
Latino 24 222 1 0.1081
South Asian 809 7616 55 0.1062
European (Finnish) 109 1726 4 0.06315
Total 1487 16006 82 0.0929

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.