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12:113357193 G / A


Filter Status
PASS
dbSNP
rs10774671
Allele Frequency
0.6685
Filtering AF
0.786 (Latino)
Allele Count
80417 / 120290
UCSC
12-113357193-G-A
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Annotations

This variant falls on 11 transcripts in 2 genes:

Note: This list may not include additional transcripts in the same gene that the variant does not overlap.
Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 43375 66280 14280 0.6544
East Asian 6768 8636 2662 0.7837
Other 588 902 192 0.6519
African 4389 10338 956 0.4246
Latino 9233 11546 3752 0.7997
South Asian 11209 15974 3917 0.7017
European (Finnish) 4855 6614 1799 0.734
Total 80417 120290 27558 0.6685

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.