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12:2788879 G / A


Filter Status
PASS
dbSNP
rs1051375
Allele Frequency
0.6953
Filtering AF
0.7291 (European (Non-Finnish))
Allele Count
73807 / 106154
UCSC
12-2788879-G-A
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 43881 59712 15726 0.7349
East Asian 4986 7564 1542 0.6592
Other 565 794 199 0.7116
African 1924 6890 241 0.2792
Latino 7532 10150 2688 0.7421
South Asian 10370 15254 3488 0.6798
European (Finnish) 4549 5790 1756 0.7857
Total 73807 106154 25640 0.6953

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.