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12:53702942 G / C

Note: This variant is multiallelic! The other alt alleles are:

Filter Status
PASS
dbSNP
rs121918547
Allele Frequency
8.238e-06
Filtering AF
0 (None)
Allele Count
1 / 121386
UCSC
12-53702942-G-C
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 0 66716 0 0
East Asian 0 8654 0 0
Other 0 908 0 0
African 0 10404 0 0
Latino 0 11578 0 0
South Asian 1 16512 0 6.056e-05
European (Finnish) 0 6614 0 0
Total 1 121386 0 8.238e-06

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.