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12:6153514 A / G


Filter Status
PASS
dbSNP
rs1063857
Allele Frequency
0.3231
Filtering AF
0.5675 (African)
Allele Count
39162 / 121200
UCSC
12-6153514-A-G
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Annotations

This variant falls on 2 transcripts in 1 genes:

Note: This list may not include additional transcripts in the same gene that the variant does not overlap.
Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 23753 66674 4191 0.3563
East Asian 638 8632 27 0.07391
Other 297 902 40 0.3293
African 6029 10400 1742 0.5797
Latino 1913 11562 193 0.1655
South Asian 4158 16506 574 0.2519
European (Finnish) 2374 6524 411 0.3639
Total 39162 121200 7178 0.3231

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.