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12:9246176 CTATGG / C


Filter Status
PASS
dbSNP
rs3832852
Allele Frequency
0.1507
Filtering AF
0.1959 (African)
Allele Count
16640 / 110432
UCSC
12-9246176-CTATGG-C
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Annotations

This variant falls on 6 transcripts in 1 genes:

Note: This list may not include additional transcripts in the same gene that the variant does not overlap.
Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 10256 62072 729 0.1652
East Asian 302 7894 7 0.03826
Other 124 840 12 0.1476
African 1904 9358 183 0.2035
Latino 780 10344 20 0.07541
South Asian 2581 13538 232 0.1906
European (Finnish) 693 6386 32 0.1085
Total 16640 110432 1215 0.1507

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.