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13:20763685 AC / A


Filter Status
PASS
dbSNP
rs1801002
Allele Frequency
0.00604
Filtering AF
0.008184 (European (Non-Finnish))
Allele Count
733 / 121352
UCSC
13-20763685-AC-A
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Annotations

This variant falls on 2 transcripts in 1 genes:

Note: This list may not include additional transcripts in the same gene that the variant does not overlap.
Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 585 66686 1 0.008772
East Asian 0 8654 0 0
Other 8 908 0 0.008811
African 13 10400 0 0.00125
Latino 47 11578 0 0.004059
South Asian 12 16512 0 0.0007267
European (Finnish) 68 6614 2 0.01028
Total 733 121352 3 0.00604

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.