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13:32972884 A / G


Filter Status
PASS
dbSNP
rs1801426
Allele Frequency
0.02266
Filtering AF
0.1045 (African)
Allele Count
2701 / 119210
UCSC
13-32972884-A-G
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Annotations

This variant falls on 11 transcripts in 2 genes:

Note: This list may not include additional transcripts in the same gene that the variant does not overlap.
Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 115 65264 1 0.001762
East Asian 221 8502 4 0.02599
Other 16 900 1 0.01778
African 1111 10112 68 0.1099
Latino 1151 11460 57 0.1004
South Asian 35 16388 1 0.002136
European (Finnish) 52 6584 1 0.007898
Total 2701 119210 133 0.02266

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.