Interested in working on the development of this resource? Apply here.

13:41135038 T / C


Filter Status
PASS
dbSNP
rs3751436
Allele Frequency
0.07039
Filtering AF
0.3736 (East Asian)
Allele Count
7695 / 109318
UCSC
13-41135038-T-C
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Annotations

This variant falls on 2 transcripts in 1 genes:

Note: This list may not include additional transcripts in the same gene that the variant does not overlap.
Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 1426 62726 22 0.02273
East Asian 3227 8388 601 0.3847
Other 57 790 3 0.07215
African 116 9124 2 0.01271
Latino 1433 11374 97 0.126
South Asian 794 10330 34 0.07686
European (Finnish) 642 6586 29 0.09748
Total 7695 109318 788 0.07039

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.