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13:52511719 C / T


Filter Status
PASS
dbSNP
rs121907992
Allele Frequency
4.969e-05
Filtering AF
2.9e-05 (European (Non-Finnish))
Allele Count
6 / 120738
UCSC
13-52511719-C-T
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 5 66710 0 7.495e-05
East Asian 0 8624 0 0
Other 0 900 0 0
African 1 9802 0 0.000102
Latino 0 11576 0 0
South Asian 0 16512 0 0
European (Finnish) 0 6614 0 0
Total 6 120738 0 4.969e-05

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.