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13:52532470 G / A


Filter Status
PASS
dbSNP
rs137853284
Allele Frequency
4.154e-05
Filtering AF
2e-05 (European (Non-Finnish))
Allele Count
5 / 120374
UCSC
13-52532470-G-A
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 4 66460 0 6.019e-05
East Asian 0 8616 0 0
Other 0 896 0 0
African 1 9710 0 0.000103
Latino 0 11570 0 0
South Asian 0 16508 0 0
European (Finnish) 0 6614 0 0
Total 5 120374 0 4.154e-05

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.