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13:52549258 A / G


Filter Status
PASS
dbSNP
rs184868522
Allele Frequency
0.0005963
Filtering AF
0.000703 (European (Non-Finnish))
Allele Count
72 / 120744
UCSC
13-52549258-A-G
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 59 66732 0 0.0008841
East Asian 0 8620 0 0
Other 0 900 0 0
African 2 9798 0 0.0002041
Latino 11 11568 0 0.0009509
South Asian 0 16512 0 0
European (Finnish) 0 6614 0 0
Total 72 120744 0 0.0005963

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.