Interested in working on the development of this resource? Apply here.

14:20940606 G / A


Filter Status
PASS
dbSNP
rs1049564
Allele Frequency
0.192
Filtering AF
0.2458 (African)
Allele Count
23251 / 121122
UCSC
14-20940606-G-A
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Annotations

This variant falls on 9 transcripts in 2 genes:

Note: This list may not include additional transcripts in the same gene that the variant does not overlap.
Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 12362 66586 1145 0.1857
East Asian 1714 8634 171 0.1985
Other 158 908 12 0.174
African 2636 10382 346 0.2539
Latino 2764 11536 330 0.2396
South Asian 2570 16470 225 0.156
European (Finnish) 1047 6606 80 0.1585
Total 23251 121122 2309 0.192

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.