Interested in working on the development of this resource? Apply here.

14:55312502 C / T


Filter Status
PASS
dbSNP
rs200891969
Allele Frequency
0.0002636
Filtering AF
0.000802 (South Asian)
Allele Count
32 / 121398
UCSC
14-55312502-C-T
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 12 66738 0 0.0001798
East Asian 0 8652 0 0
Other 0 908 0 0
African 0 10398 0 0
Latino 0 11576 0 0
South Asian 20 16512 0 0.001211
European (Finnish) 0 6614 0 0
Total 32 121398 0 0.0002636

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.