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15:100230557 A / G


Filter Status
PASS
dbSNP
rs121918530
Allele Frequency
0.0009539
Filtering AF
0.001281 (European (Non-Finnish))
Allele Count
110 / 115316
UCSC
15-100230557-A-G
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 98 64236 0 0.001526
East Asian 0 8470 0 0
Other 0 842 0 0
African 4 9100 0 0.0004396
Latino 2 10908 0 0.0001834
South Asian 4 15222 0 0.0002628
European (Finnish) 2 6538 0 0.0003059
Total 110 115316 0 0.0009539

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.