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15:102186966 G / A


Filter Status
PASS
dbSNP
rs139709573
Allele Frequency
0.0002389
Filtering AF
0.000284 (Latino)
Allele Count
29 / 121370
UCSC
15-102186966-G-A
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 22 66720 0 0.0003297
East Asian 0 8654 0 0
Other 0 906 0 0
African 0 10402 0 0
Latino 7 11568 0 0.0006051
South Asian 0 16510 0 0
European (Finnish) 0 6610 0 0
Total 29 121370 0 0.0002389

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.