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15:28356859 C / T


Filter Status
PASS
dbSNP
rs1129038
Allele Frequency
0.5073
Filtering AF
0.7419 (European (Non-Finnish))
Allele Count
59513 / 117314
UCSC
15-28356859-C-T
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Annotations

This variant falls on 4 transcripts in 1 genes:

non coding transcript exon
Note: This list may not include additional transcripts in the same gene that the variant does not overlap.
Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 48980 65528 19326 0.7475
East Asian 7 8610 0 0.000813
Other 409 866 125 0.4723
African 1246 10270 87 0.1213
Latino 1679 11464 133 0.1465
South Asian 1379 13988 77 0.09858
European (Finnish) 5813 6588 2559 0.8824
Total 59513 117314 22307 0.5073

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.