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15:33905410 A / G


Filter Status
PASS
dbSNP
rs2229116
Allele Frequency
0.23
Filtering AF
0.3198 (Latino)
Allele Count
27089 / 117770
UCSC
15-33905410-A-G
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Annotations

This variant falls on 2 transcripts in 1 genes:

Note: This list may not include additional transcripts in the same gene that the variant does not overlap.
Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 14441 65386 1554 0.2209
East Asian 1375 8364 116 0.1644
Other 188 874 18 0.2151
African 1448 9512 84 0.1522
Latino 3706 11276 592 0.3287
South Asian 3970 15880 509 0.25
European (Finnish) 1961 6478 283 0.3027
Total 27089 117770 3156 0.23

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.