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15:34520687 T / C


Filter Status
PASS
dbSNP
rs116858574
Allele Frequency
0.00827
Filtering AF
0.01299 (European (Non-Finnish))
Allele Count
1004 / 121400
UCSC
15-34520687-T-C
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Annotations

This variant falls on 24 transcripts in 2 genes:

Note: This list may not include additional transcripts in the same gene that the variant does not overlap.
Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 916 66728 8 0.01373
East Asian 6 8654 0 0.0006933
Other 5 908 0 0.005507
African 24 10406 0 0.002306
Latino 43 11578 0 0.003714
South Asian 4 16512 0 0.0002422
European (Finnish) 6 6614 0 0.0009072
Total 1004 121400 8 0.00827

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.