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15:48426484 A / G


Filter Status
PASS
dbSNP
rs1426654
Allele Frequency
0.2283
Filtering AF
0.9741 (East Asian)
Allele Count
27693 / 121320
UCSC
15-48426484-A-G
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Annotations

This variant falls on 3 transcripts in 1 genes:

Note: This list may not include additional transcripts in the same gene that the variant does not overlap.
Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 274 66700 3 0.004108
East Asian 8578 8650 4254 0.9917
Other 125 908 15 0.1377
African 8334 10402 3398 0.8012
Latino 6484 11538 2052 0.562
South Asian 3808 16508 747 0.2307
European (Finnish) 90 6614 3 0.01361
Total 27693 121320 10472 0.2283

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.