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15:51502986 G / A


Filter Status
PASS
dbSNP
rs10046
Allele Frequency
0.4492
Filtering AF
0.5121 (European (Non-Finnish))
Allele Count
54493 / 121312
UCSC
15-51502986-G-A
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Annotations

This variant falls on 13 transcripts in 2 genes:

Note: This list may not include additional transcripts in the same gene that the variant does not overlap.
Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 34475 66722 8933 0.5167
East Asian 4457 8626 1156 0.5167
Other 430 908 107 0.4736
African 2653 10378 341 0.2556
Latino 3570 11556 590 0.3089
South Asian 5429 16512 939 0.3288
European (Finnish) 3479 6610 906 0.5263
Total 54493 121312 12972 0.4492

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.