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15:60653205 C / A


Filter Status
PASS
dbSNP
rs17845226
Allele Frequency
0.09379
Filtering AF
0.131 (European (Non-Finnish))
Allele Count
11350 / 121018
UCSC
15-60653205-C-A
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Annotations

This variant falls on 32 transcripts in 1 genes:

missense 5' UTR
3' UTR non coding transcript exon
Note: This list may not include additional transcripts in the same gene that the variant does not overlap.
Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 8879 66602 601 0.1333
East Asian 2 8634 0 0.0002316
Other 83 904 3 0.09181
African 237 10380 6 0.02283
Latino 685 11528 22 0.05942
South Asian 795 16360 36 0.04859
European (Finnish) 669 6610 33 0.1012
Total 11350 121018 701 0.09379

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.