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15:65153690 G / A

Warning! This variant is only covered in 35758 individuals (adjusted allele number = 71516).
This means that the site is covered in fewer than 80% of the individuals in ExAC, which may indicate a low-quality site.

Filter Status
Allele Frequency
Filtering AF
0.7651 (East Asian)
Allele Count
21099 / 71516
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.


This variant falls on 3 transcripts in 2 genes:

Note: This list may not include additional transcripts in the same gene that the variant does not overlap.
Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 8483 37996 649 0.2233
East Asian 5500 7030 2085 0.7824
Other 144 466 11 0.309
African 961 6284 55 0.1529
Latino 2994 6446 507 0.4645
South Asian 2308 11116 210 0.2076
European (Finnish) 709 2178 58 0.3255
Total 21099 71516 3575 0.295

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.