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15:65319214 G / A


Filter Status
VQSRTrancheSNP99.60to99.80
dbSNP
rs397514614
Allele Frequency
8.283e-06
Filtering AF
0 (None)
Allele Count
1 / 120722
UCSC
15-65319214-G-A
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 1 66724 0 1.499e-05
East Asian 0 8626 0 0
Other 0 898 0 0
African 0 9790 0 0
Latino 0 11562 0 0
South Asian 0 16508 0 0
European (Finnish) 0 6614 0 0
Total 1 120722 0 8.283e-06

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.