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15:67482818 G / T


Filter Status
VQSRTrancheSNP99.95to100.00
dbSNP
rs201263330
Allele Frequency
0.0008649
Filtering AF
0.002038 (African)
Allele Count
95 / 109842
UCSC
15-67482818-G-T
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 36 61464 0 0.0005857
East Asian 13 7794 0 0.001668
Other 0 796 0 0
African 26 8938 0 0.002909
Latino 10 9976 0 0.001002
South Asian 5 15844 0 0.0003156
European (Finnish) 5 5030 0 0.000994
Total 95 109842 0 0.0008649

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.