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15:72643548 C / T


Filter Status
PASS
dbSNP
rs1800429
Allele Frequency
3.295e-05
Filtering AF
3e-05 (Latino)
Allele Count
4 / 121382
UCSC
15-72643548-C-T
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 1 66726 0 1.499e-05
East Asian 0 8654 0 0
Other 0 908 0 0
African 1 10402 0 9.614e-05
Latino 2 11570 0 0.0001729
South Asian 0 16508 0 0
European (Finnish) 0 6614 0 0
Total 4 121382 0 3.295e-05

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.