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15:89866657 C / G


Filter Status
PASS
dbSNP
rs113994097
Allele Frequency
0.0008428
Filtering AF
0.00075 (European (Non-Finnish))
Allele Count
101 / 119838
UCSC
15-89866657-C-G
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 62 66130 0 0.0009375
East Asian 0 8604 0 0
Other 1 884 0 0.001131
African 1 10252 0 9.754e-05
Latino 0 11376 0 0
South Asian 1 16230 0 6.161e-05
European (Finnish) 36 6362 0 0.005659
Total 101 119838 0 0.0008428

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.