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16:14041958 T / C


Filter Status
PASS
dbSNP
rs1799801
Allele Frequency
0.2723
Filtering AF
0.3004 (South Asian)
Allele Count
33007 / 121226
UCSC
16-14041958-T-C
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Annotations

This variant falls on 3 transcripts in 1 genes:

non coding transcript exon
Note: This list may not include additional transcripts in the same gene that the variant does not overlap.
Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 19613 66646 2859 0.2943
East Asian 2026 8612 225 0.2353
Other 248 908 37 0.2731
African 1850 10398 175 0.1779
Latino 2611 11552 301 0.226
South Asian 5076 16508 833 0.3075
European (Finnish) 1583 6602 176 0.2398
Total 33007 121226 4606 0.2723

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.