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16:27357927 C / T


Filter Status
PASS
dbSNP
rs2234895
Allele Frequency
0.06952
Filtering AF
0.08864 (European (Non-Finnish))
Allele Count
8427 / 121214
UCSC
16-27357927-C-T
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Annotations

This variant falls on 15 transcripts in 1 genes:

Note: This list may not include additional transcripts in the same gene that the variant does not overlap.
Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 6031 66604 282 0.09055
East Asian 1 8624 0 0.000116
Other 72 908 0 0.0793
African 544 10378 14 0.05242
Latino 414 11576 10 0.03576
South Asian 867 16510 35 0.05251
European (Finnish) 498 6614 25 0.07529
Total 8427 121214 366 0.06952

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.