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16:27373964 T / C


Filter Status
PASS
dbSNP
rs1805012
Allele Frequency
0.09567
Filtering AF
0.1126 (Latino)
Allele Count
11598 / 121234
UCSC
16-27373964-T-C
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 6987 66634 371 0.1049
East Asian 666 8638 19 0.0771
Other 62 904 1 0.06858
African 912 10380 41 0.08786
Latino 1362 11558 82 0.1178
South Asian 949 16506 33 0.05749
European (Finnish) 660 6614 38 0.09979
Total 11598 121234 585 0.09567

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.