Interested in working on the development of this resource? Apply here.

16:3293405 C / T


Filter Status
PASS
dbSNP
rs28940578
Allele Frequency
0.0001483
Filtering AF
0.000283 (Latino)
Allele Count
18 / 121410
UCSC
16-3293405-C-T
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 11 66740 0 0.0001648
East Asian 0 8654 0 0
Other 0 908 0 0
African 0 10406 0 0
Latino 7 11576 0 0.0006047
South Asian 0 16512 0 0
European (Finnish) 0 6614 0 0
Total 18 121410 0 0.0001483

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.