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16:3293529 C / T


Filter Status
PASS
dbSNP
rs104895085
Allele Frequency
4.95e-05
Filtering AF
7.8e-05 (African)
Allele Count
6 / 121204
UCSC
16-3293529-C-T
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 2 66624 0 3.002e-05
East Asian 0 8654 0 0
Other 0 906 0 0
African 3 10386 0 0.0002889
Latino 0 11576 0 0
South Asian 1 16444 0 6.081e-05
European (Finnish) 0 6614 0 0
Total 6 121204 0 4.95e-05

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.