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16:3299468 C / T


Filter Status
PASS
dbSNP
rs11466024
Allele Frequency
0.01295
Filtering AF
0.05001 (East Asian)
Allele Count
1551 / 119750
UCSC
16-3299468-C-T
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 639 65696 7 0.009727
East Asian 465 8600 12 0.05407
Other 17 896 0 0.01897
African 42 10016 0 0.004193
Latino 50 11518 1 0.004341
South Asian 237 16428 2 0.01443
European (Finnish) 101 6596 3 0.01531
Total 1551 119750 25 0.01295

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.