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16:3304625 T / A


Warning! This variant is only covered in 44681 individuals (adjusted allele number = 89362).
This means that the site is covered in fewer than 80% of the individuals in ExAC, which may indicate a low-quality site.


Filter Status
PASS
dbSNP
rs104895076
Allele Frequency
0.0001007
Filtering AF
0.000222 (South Asian)
Allele Count
9 / 89362
UCSC
16-3304625-T-A
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 2 48076 0 4.16e-05
East Asian 0 6392 0 0
Other 0 668 0 0
African 0 6636 0 0
Latino 0 8234 0 0
South Asian 7 14762 0 0.0004742
European (Finnish) 0 4594 0 0
Total 9 89362 0 0.0001007

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.