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16:50745656 G / A

Note: This variant is multiallelic! The other alt alleles are:

Filter Status
Allele Frequency
Filtering AF
0.002011 (East Asian)
Allele Count
77 / 121180
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Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.


This variant falls on 10 transcripts in 2 genes:

Note: This list may not include additional transcripts in the same gene that the variant does not overlap.
Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 51 66642 1 0.0007653
East Asian 25 8642 0 0.002893
Other 0 906 0 0
African 0 10390 0 0
Latino 0 11550 0 0
South Asian 1 16486 0 6.066e-05
European (Finnish) 0 6564 0 0
Total 77 121180 1 0.0006354

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.