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16:50746199 G / A


Filter Status
PASS
dbSNP
rs104895444
Allele Frequency
0.001056
Filtering AF
0.001359 (European (Non-Finnish))
Allele Count
128 / 121254
UCSC
16-50746199-G-A
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 107 66630 1 0.001606
East Asian 0 8642 0 0
Other 0 908 0 0
African 2 10378 0 0.0001927
Latino 9 11574 0 0.0007776
South Asian 10 16508 0 0.0006058
European (Finnish) 0 6614 0 0
Total 128 121254 1 0.001056

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.