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16:56899326 C / T


Filter Status
PASS
dbSNP
rs371443644
Allele Frequency
7.418e-05
Filtering AF
0.00046 (East Asian)
Allele Count
9 / 121322
UCSC
16-56899326-C-T
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 1 66664 0 1.5e-05
East Asian 8 8646 0 0.0009253
Other 0 906 0 0
African 0 10404 0 0
Latino 0 11576 0 0
South Asian 0 16512 0 0
European (Finnish) 0 6614 0 0
Total 9 121322 0 7.418e-05

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.