Interested in working on the development of this resource? Apply here.

16:56921879 G / A


Filter Status
PASS
dbSNP
rs138977195
Allele Frequency
0.0003975
Filtering AF
0.000482 (European (Non-Finnish))
Allele Count
48 / 120752
UCSC
16-56921879-G-A
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 42 66208 0 0.0006344
East Asian 0 8624 0 0
Other 0 898 0 0
African 2 10348 0 0.0001933
Latino 4 11552 0 0.0003463
South Asian 0 16510 0 0
European (Finnish) 0 6612 0 0
Total 48 120752 0 0.0003975

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.