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16:56936319 C / T


Filter Status
PASS
dbSNP
rs12708965
Allele Frequency
0.03057
Filtering AF
0.06935 (African)
Allele Count
3710 / 121378
UCSC
16-56936319-C-T
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 1136 66722 17 0.01703
East Asian 246 8652 4 0.02843
Other 26 906 1 0.0287
African 766 10398 37 0.07367
Latino 498 11574 15 0.04303
South Asian 825 16512 28 0.04996
European (Finnish) 213 6614 5 0.0322
Total 3710 121378 107 0.03057

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.