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16:56994528 C / T


Warning! This variant is only covered in 17011 individuals (adjusted allele number = 34022).
This means that the site is covered in fewer than 80% of the individuals in ExAC, which may indicate a low-quality site.


Filter Status
PASS
dbSNP
rs17231506
Allele Frequency
0.3844
Filtering AF
0.4653 (Latino)
Allele Count
13077 / 34022
UCSC
16-56994528-C-T
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Annotations
No annotations were found for this variant.
Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 7425 18040 985 0.4116
East Asian 544 1978 41 0.275
Other 98 250 16 0.392
African 412 1824 26 0.2259
Latino 1099 2246 169 0.4893
South Asian 3086 8742 525 0.353
European (Finnish) 413 942 56 0.4384
Total 13077 34022 1818 0.3844

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.