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16:68856041 G / A


Filter Status
PASS
dbSNP
rs33935154
Allele Frequency
0.004225
Filtering AF
0.04281 (African)
Allele Count
513 / 121410
UCSC
16-68856041-G-A
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Annotations

This variant falls on 8 transcripts in 3 genes:

Note: This list may not include additional transcripts in the same gene that the variant does not overlap.
Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 8 66738 0 0.0001199
East Asian 0 8654 0 0
Other 1 908 0 0.001101
African 481 10406 15 0.04622
Latino 23 11578 0 0.001987
South Asian 0 16512 0 0
European (Finnish) 0 6614 0 0
Total 513 121410 15 0.004225

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.