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16:68857441 T / C

Note: This variant is found in phase with 16-68857439-G-A in 1 individuals.

Filter Status
PASS
dbSNP
rs1801552
Allele Frequency
0.6548
Filtering AF
0.8709 (African)
Allele Count
79474 / 121370
UCSC
16-68857441-T-C
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Annotations

This variant falls on 8 transcripts in 3 genes:

Note: This list may not include additional transcripts in the same gene that the variant does not overlap.
Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 41649 66738 13014 0.6241
East Asian 5524 8632 1761 0.6399
Other 560 908 175 0.6167
African 9213 10398 4084 0.886
Latino 7757 11570 2597 0.6704
South Asian 10921 16512 3649 0.6614
European (Finnish) 3850 6612 1124 0.5823
Total 79474 121370 26404 0.6548

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.