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16:75263661 G / A


Filter Status
PASS
dbSNP
rs7190458
Allele Frequency
0.05488
Filtering AF
0.2513 (African)
Allele Count
6605 / 120350
UCSC
16-75263661-G-A
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Annotations

This variant falls on 17 transcripts in 3 genes:

Note: This list may not include additional transcripts in the same gene that the variant does not overlap.
Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 2871 65866 58 0.04359
East Asian 223 8606 6 0.02591
Other 34 898 1 0.03786
African 2680 10328 349 0.2595
Latino 425 11540 4 0.03683
South Asian 111 16504 0 0.006726
European (Finnish) 261 6608 4 0.0395
Total 6605 120350 422 0.05488

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.