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16:78466437 C / G


Filter Status
PASS
dbSNP
rs3764340
Allele Frequency
0.07435
Filtering AF
0.09319 (African)
Allele Count
8977 / 120740
UCSC
16-78466437-C-G
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Annotations

This variant falls on 7 transcripts in 1 genes:

Note: This list may not include additional transcripts in the same gene that the variant does not overlap.
Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 4292 66732 142 0.06432
East Asian 790 8620 41 0.09165
Other 64 900 1 0.07111
African 963 9792 49 0.09835
Latino 948 11572 39 0.08192
South Asian 1514 16510 94 0.0917
European (Finnish) 406 6614 12 0.06138
Total 8977 120740 378 0.07435

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.