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16:8900255 C / T


Filter Status
PASS
dbSNP
rs80338700
Allele Frequency
4.127e-05
Filtering AF
2.1e-05 (South Asian)
Allele Count
5 / 121168
UCSC
16-8900255-C-T
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 3 66636 0 4.502e-05
East Asian 0 8644 0 0
Other 0 906 0 0
African 0 10352 0 0
Latino 0 11528 0 0
South Asian 2 16494 0 0.0001213
European (Finnish) 0 6608 0 0
Total 5 121168 0 4.127e-05

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.